ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ep4B1 - ECOD Domain | ECOD

ECOD/Domains/e4ep4B1

e4ep4B1

UID: 000989040

PDB

Range: B:1-166
PDB: 4EP4 chain B(all domains)
UniProt: Q5SJC4 (all domains)
Gene: ruvC

Molecule: Crossover junction endodeoxyribonuclease RuvC

3D Structure

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Related Domains

Browse other domains in RuvC →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRuvC(2484.1.1.25)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Crossover junction endodeoxyribonuclease RuvC

ClanCL0219RNase_H

External Links

ECOD PDB View: 4EP4 RCSB PDB: 4EP4 PDBe: 4EP4 UniProt: Q5SJC4

Downloads

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