ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vpbF1 - ECOD Domain | ECOD

ECOD/Domains/e3vpbF1

e3vpbF1

UID: 000991102

PDB

Range: F:1-56
PDB: 3VPB chain F(all domains)
UniProt: Q976J8 (all domains)
Gene: lysW

Molecule: Alpha-aminoadipate carrier protein lysW

3D Structure

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Related Domains

Browse other domains in LysW-like_globular →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyLysW-like_globular(375.1.1.63)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF21344Zn_ribbon_LysW

Alpha-aminoadipate carrier protein LysW-like, globular domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 3VPB RCSB PDB: 3VPB PDBe: 3VPB UniProt: Q976J8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.