ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p39A1 - ECOD Domain | ECOD

ECOD/Domains/e1p39A1

e1p39A1

UID: 000099448

PDB

Range: A:1-297
PDB: 1P39 chain A(all domains)
UniProt: P07617 (all domains)
Gene: OPG102

Molecule: VP39

3D Structure

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Related Domains

Browse other domains in PARP_regulatory →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPARP_regulatory(2003.1.5.11)

Ligands

in contact, ≤ 4 Å

7-Methyl-7,8-dihydroguanosine 5'-(tetrahydrogen triphosphate)MGT
drugDrugBank DB03358
S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Pfam Families

PF01358PARP_regulatory

Poly A polymerase regulatory subunit

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1P39 RCSB PDB: 1P39 PDBe: 1P39 UniProt: P07617

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.