ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rjdC1 - ECOD Domain | ECOD

ECOD/Domains/e1rjdC1

e1rjdC1

UID: 000099558

PDB

Range: C:2-328
PDB: 1RJD chain C(all domains)
UniProt: Q04081 (all domains)
Gene: PPM1

Molecule: carboxy methyl transferase for protein phosphatase 2A catalytic subunit

3D Structure

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Related Domains

Browse other domains in LCM →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyLCM(2003.1.5.35)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
AdemetionineSAM
drugDrugBank DB00118

+ 1 additive (Sulfate ion)

Pfam Families

Leucine carboxyl methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1RJD RCSB PDB: 1RJD PDBe: 1RJD UniProt: Q04081

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.