ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kpgB1 - ECOD Domain | ECOD

ECOD/Domains/e1kpgB1

e1kpgB1

UID: 000099747

PDB

Range: B:13-287
PDB: 1KPG chain B(all domains)
UniProt: P9WPB7 (all domains)
Gene: cmaA1

Molecule: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1

3D Structure

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Related Domains

Browse other domains in CMAS, Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCMAS, Methyltransf_25(2003.1.5.152)

Ligands

in contact, ≤ 4 Å

Cetrimonium16A
drugDrugBank DB01718
S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Carbonate ion)

Pfam Families

Mycolic acid cyclopropane synthetase

ClanCL0063NADP_Rossmann

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1KPG RCSB PDB: 1KPG PDBe: 1KPG UniProt: P9WPB7

Downloads

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Carbonate ionCO3
DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.