ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2igtC1 - ECOD Domain | ECOD

ECOD/Domains/e2igtC1

e2igtC1

UID: 000099834

PDB

Range: C:1-309
PDB: 2IGT chain C(all domains)
UniProt: A9CKD6 (all domains)
Gene: Atu0340

Molecule: SAM dependent methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltrans_SAM →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltrans_SAM(2003.1.5.74)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 3 additives (Acetic acid, Formic acid, Glycerin)

Acetic acidACY
DrugBank DB03166

Pfam Families

PF10672Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2IGT RCSB PDB: 2IGT PDBe: 2IGT UniProt: A9CKD6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acid

DrugBank DB01942

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.