T-group (topology)
1.1.2 double psi
Ligands and drugs
8,899
Member domains
1,811
with ligand contacts (≤ 4 Å)
20.4% of members
1,231
with DrugDomain annotations
13.8% of members
304
with a DrugBank compound
3.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 1.1.2 belongs to X-group 1 cradle loop barrel, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04137 | GTP | Guanosine-5'-Triphosphate | 25 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 24 |
| DB00171 | ATP | ATP | 22 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 21 |
| DB03532 | G2P | Phosphomethylphosphonic acid guanylate ester | 18 |
| DB04005 | UTP | Uridine 5'-triphosphate | 14 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 12 |
| DB04022 | G4P | Guanosine tetraphosphate | 12 |
| DB02078 | PG5 | Triglyme | 10 |
| DB04160 | PPV | Pyrophosphoric acid | 6 |
| DB00141 | NAG | N-Acetylglucosamine | 4 |
| DB01902 | NEN | 1-Ethyl-Pyrrolidine-2,5-Dione | 4 |
| DB01992 | COA | Coenzyme A | 4 |
| DB02333 | DUT | Deoxyuridine-5'-Triphosphate | 4 |
| DB03170 | COD | Dephospho Coenzyme A | 4 |
| DB03929 | DSN | D-Serine | 4 |
| DB04788 | TGT | Tagetitoxin | 4 |
| DB03345 | BME | Mercaptoethanol | 3 |
| DB00131 | AMP | Adenosine phosphate | 2 |
| DB00133 | SER | Serine | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 1,235 |
| MGD | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | 189 |
| 4MOmetal | MOLYBDENUM(IV) ION | 70 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 33 |
| 2TM | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine | 32 |
| W0F | [[(2~{S},3~{R},4~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3-methoxy-4-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate | 32 |
| ZNmetal | ZINC ION | 32 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 31 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 29 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 28 |
| MD1 | PHOSPHORIC ACID 4-(2-AMINO-4-OXO-3,4,5,6,-TETRAHYDRO-PTERIDIN-6-YL)-2-HYDROXY-3,4-DIMERCAPTO-BUT-3-EN-YL ESTER GUANYLATE ESTER | 24 |
| SF4 | IRON/SULFUR CLUSTER | 23 |
| CL | CHLORIDE ION | 21 |
| G2P | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | 21 |
| POP | PYROPHOSPHATE 2- | 19 |
| MNmetal | MANGANESE (II) ION | 18 |
| UTP | URIDINE 5'-TRIPHOSPHATE | 18 |
| DPO | DIPHOSPHATE | 17 |
| PGD | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | 16 |
| G4P | GUANOSINE-5',3'-TETRAPHOSPHATE | 15 |