F-group (family)

1.1.5.28 Peptidase_S46

Open in classification tree →Pfam PF10459 →

Ligands and drugs

Member domains

with ligand contacts (≤ 4 Å)

81.4% of members

with DrugDomain annotations

81.4% of members

with a DrugBank compound

34.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 1.1.5.28 belongs to X-group 1 cradle loop barrel, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB00135	TYR	Tyrosine	10
DB00125	ARG	Arginine	6
DB00128	ASP	Aspartic acid	6
DB00120	PHE	Phenylalanine	2
DB00142	GLU	Glutamic acid	2
DB00161	VAL	Valine	2
DB00174	ASN	Asparagine	2
DB02884	ALC	3-Cyclohexyl-L-alanine	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
CL	CHLORIDE ION	39
TYR	TYROSINE	10
ZNmetal	ZINC ION	8
ARG	ARGININE	6
ASP	ASPARTIC ACID	4
Kmetal	POTASSIUM ION	3
2L1	2-[(4-methyl-1H-imidazol-5-yl)methyl]-1,2,3,4-tetrahydroisoquinoline	2
ALC	2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID	2
ASN	ASPARAGINE	2
C8O	2-(2-azanylethylamino)-5-nitro-benzoic acid	2
GLU	GLUTAMIC ACID	2
I81	1-[(3-methoxyphenyl)methyl]piperidine-4-carboxamide	2
I87	(2S)-N,2-dimethyl-N-(propan-2-yl)morpholine-4-sulfonamide	2
I8A	N-(cyclopropylmethyl)-2,2,3,3-tetramethylazetidine-1-carboxamide	2
I8D	(4-chlorophenyl)(thiomorpholin-4-yl)methanone	2
I8G	2-(4-fluorophenoxy)-1-(pyrrolidin-1-yl)ethan-1-one	2
I8J	5-fluoro-1-(1-methylcyclopropane-1-sulfonyl)-1,2,3,6-tetrahydropyridine	2
I8M	2-[(morpholin-4-yl)methyl]phenol	2
JHJ	N-(4-methoxyphenyl)-N'-pyridin-4-ylurea	2
K0G	N-phenyl-N'-pyridin-3-ylurea	2