T-group (topology)
10.11.1 Thiamin pyrophosphokinase, substrate-binding domain
Ligands and drugs
87
Member domains
25
with ligand contacts (≤ 4 Å)
28.7% of members
22
with DrugDomain annotations
25.3% of members
17
with a DrugBank compound
19.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 10.11.1 belongs to X-group 10 jelly-roll, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00152 | VIB | Thiamine | 11 |
| DB04768 | PYI | Pyrithiamine Pyrophosphate | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| VIB | 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM | 12 |
| TPP | THIAMINE DIPHOSPHATE | 6 |
| CL | CHLORIDE ION | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| PYI | 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-2-METHYLPYRIDINIUM | 2 |
| VNP | 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-(2-{[HYDROXY(PHOSPHONOAMINO)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM | 2 |