ECOD
F-group (family)

102.1.3.1 PAP_assoc

Open in classification tree →Pfam PF03828 →

Ligands and drugs

263
Member domains
74
with ligand contacts (≤ 4 Å)
28.1% of members
67
with DrugDomain annotations
25.5% of members
49
with a DrugBank compound
18.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 102.1.3.1 belongs to X-group 102 HhH/H2TH, which binds 6.9 ligand superclasses per 20 proteins, narrower than 61% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB04005UTPUridine 5'-triphosphate22
DB00171ATPATP4
DB03685U5PUridine monophosphate3
DB02333DUTDeoxyuridine-5'-Triphosphate2
DB02431CTPCytidine-5'-Triphosphate2
DB04137GTPGuanosine-5'-Triphosphate2
DB018603ATCordycepin Triphosphate1

Most frequently bound compounds

PDB ligandNameDomains in contact
UTPURIDINE 5'-TRIPHOSPHATE22
CLCHLORIDE ION14
MGmetalMAGNESIUM ION9
IODIODIDE ION8
2KH5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine6
UPU[(2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-4-HYDROXY-2-(HYDROXYMETHYL)TETRAHYDROFURAN-3-YL HYDROGEN (S)-PHOSPHATE5
ATPADENOSINE-5'-TRIPHOSPHATE4
BRBROMIDE ION4
U5PURIDINE-5'-MONOPHOSPHATE3
CTPCYTIDINE-5'-TRIPHOSPHATE2
DUTDEOXYURIDINE-5'-TRIPHOSPHATE2
GTPGUANOSINE-5'-TRIPHOSPHATE2
ZNmetalZINC ION2
2TM5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine1
3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE1
KmetalPOTASSIUM ION1
P5E[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate1