T-group (topology)
1084.1.1 Photosystem II reaction center W protein, chloroplastic
Ligands and drugs
113
Member domains
65
with ligand contacts (≤ 4 Å)
57.5% of members
21
with DrugDomain annotations
18.6% of members
21
with a DrugBank compound
18.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 1084.1.1 belongs to X-group 1084 Photosystem II reaction center W protein, chloroplastic, which has 8 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02133 | CLA | Chlorophyll A | 21 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 4 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 3 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 2 |
| DB06755 | BCR | Beta carotene | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 63 |
| CLA | CHLOROPHYLL A | 62 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 24 |
| DGA | DIACYL GLYCEROL | 13 |
| A86 | (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'-yl acetate | 7 |
| BCR | BETA-CAROTENE | 7 |
| 4RF | Tripalmitoylglycerol | 6 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 6 |
| ERG | ERGOSTEROL | 6 |
| 3PH | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | 2 |
| AJP | Digitonin | 2 |
| LNL | ALPHA-LINOLENIC ACID | 2 |
| LMU | DODECYL-ALPHA-D-MALTOSIDE | 1 |