F-group (family)
109.2.1.13 Glyco_hydro_76
Ligands and drugs
106
Member domains
37
with ligand contacts (≤ 4 Å)
34.9% of members
38
with DrugDomain annotations
35.8% of members
20
with a DrugBank compound
18.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 109.2.1.13 belongs to X-group 109 Repetitive alpha hairpins, which binds 9.1 ligand superclasses per 20 proteins, broader than 82% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03955 | DMJ | 1-deoxymannojirimycin | 2 |
| DB04545 | IFM | Afegostat | 2 |
| DB14756 | SRT | meso-Tartaric acid | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MAN | alpha-D-mannopyranose | 9 |
| CAmetal | CALCIUM ION | 7 |
| PBW | (1~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol | 4 |
| 7K2 | [(3S,4R,5R)-4,5-dihydroxypiperidin-3-yl]methyl 1-thio-alpha-D-mannopyranoside | 2 |
| DMJ | 1-DEOXYMANNOJIRIMYCIN | 2 |
| IFM | 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE | 2 |
| M96 | (1~{S},2~{R},3~{S},4~{R},5~{R})-5-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol | 2 |
| SRT | S,R MESO-TARTARIC ACID | 2 |
| NAmetal | SODIUM ION | 1 |
| P6G | HEXAETHYLENE GLYCOL | 1 |
| PA1 | 2-amino-2-deoxy-alpha-D-glucopyranose | 1 |
| QE8 | (1~{R},2~{R},3~{R},4~{S},5~{R})-4-[[(1~{S},2~{S},3~{S},4~{R},5~{R})-5-(hydroxymethyl)-2,3,4-tris(oxidanyl)cyclohexyl]oxymethyl]cyclohexane-1,2,3,5-tetrol | 1 |
| UKQ | (1R,6S)-5beta-(Hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2beta,3beta,4alpha-triol | 1 |
| UKT | (1R,2R,3R,4S,5R)-4-(hydroxymethyl)cyclohexane-1,2,3,5-tetrol | 1 |