F-group (family)

109.2.1.14 DUF608

Open in classification tree →Pfam PF04685 →

Ligands and drugs

Member domains

with ligand contacts (≤ 4 Å)

59.0% of members

with DrugDomain annotations

51.3% of members

with a DrugBank compound

38.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 109.2.1.14 belongs to X-group 109 Repetitive alpha hairpins, which binds 9.1 ligand superclasses per 20 proteins, broader than 82% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB02379	BGC	Beta-D-Glucose	6
DB04282	G2F	2-deoxy-2-fluoro-α-D-glucose	2
DB04545	IFM	Afegostat	2
DB03206	NOJ	Duvoglustat	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
CAmetal	CALCIUM ION	38
BGC	beta-D-glucopyranose	8
CL	CHLORIDE ION	5
MGmetal	MAGNESIUM ION	4
BXX	beta-D-arabinofuranose	2
G2F	2-deoxy-2-fluoro-alpha-D-glucopyranose	2
IFM	5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE	2
XHR	(1R,2R,3R,4S)-4-[8-(azanyldiazenyl)octylamino]-3-(hydroxymethyl)cyclopentane-1,2-diol	2
945	[(1~{R},2~{R},3~{R},4~{S},5~{R})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate	1
9FQ	(3~{a}~{S},4~{R},5~{S},6~{R},7~{R},7~{a}~{R})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{a},4,5,6,7,7~{a}-hexahydrobenzo[d][1,3,2]dioxathiole-4,5,6-triol	1
AEZ	(4~{S},5~{S},6~{R},7~{R})-7-(hydroxymethyl)-4,5,6,7-tetrahydro-1~{H}-benzimidazole-4,5,6-triol	1
GIM	GLUCOIMIDAZOLE	1
GLC	alpha-D-glucopyranose	1
GLF	alpha-D-glucopyranosyl fluoride	1
NFG	2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside	1
NOJ	1-DEOXYNOJIRIMYCIN	1
PO8	(1~{R},2~{S},3~{S},4~{S},5~{R},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol	1