ECOD
F-group (family)

109.4.1.241 DUF3458_C

Open in classification tree →Pfam PF17432 →

Ligands and drugs

142
Member domains
112
with ligand contacts (≤ 4 Å)
78.9% of members
101
with DrugDomain annotations
71.1% of members
82
with a DrugBank compound
57.7% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 109.4.1.241 belongs to X-group 109 Repetitive alpha hairpins, which binds 9.1 ligand superclasses per 20 proteins, broader than 82% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00125ARGArginine3
DB03424BESUbenimex3
DB04310BB22-[(Formyl-Hydroxy-Amino)-Methyl]-Heptanoic Acid [1-(2-Hydroxymethyl-Pyrrolidine-1-Carbonyl)-2-Methyl-Propyl]-Amide2
DB00123LYSLysine1
DB00134METMethionine1
DB00135TYRTyrosine1
DB00142GLUGlutamic acid1
DB00150TRPTryptophan1
DB07448BEY(2S)-3-[(R)-[(1S)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]-2-benzylpropanoic acid1
DB08437PUYPuromycin1
DB08506S23N-{(2S)-3-[(1R)-1-aminoethyl](hydroxy)phosphoryl-2-benzylpropanoyl}-L-phenylalanine1

Most frequently bound compounds

PDB ligandNameDomains in contact
MGmetalMAGNESIUM ION45
NAmetalSODIUM ION20
CLCHLORIDE ION3
0A1O-methyl-L-tyrosine2
7MF[(7~{S})-1-bromanyl-6,6-bis(oxidanyl)-4-phenyl-5,7,8,9-tetrahydrobenzo[7]annulen-7-yl]azanium2
BB2ACTINONIN2
GMC(2R,3R,4S,5S)-4-AMINO-2-[6-(DIMETHYLAMINO)-9H-PURIN-9-YL]-5-(HYDROXYMETHYL)TETRAHYDRO-3-FURANOL2
METMETHIONINE2
19N[(1R)-1-amino-5-carbamimidamidopentyl]phosphonic acid1
1OS[(R)-amino(4-carbamimidoylphenyl)methyl]phosphonic acid1
1OT{(R)-amino[4-(1H-pyrazol-1-yl)phenyl]methyl}phosphonic acid1
1OU[(R)-amino(4-carbamimidamidophenyl)methyl]phosphonic acid1
2X0[(1R)-1-amino-3-phenylpropyl]phosphonic acid1
32Q(2S)-2-[4-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid1
3793-{[(R)-1-amino-3-(pyridin-3-yl)propyl](hydroxy)phosphoryl}-(S)-2-benzylpropanoic acid1
37B(2S)-3-[(S)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]-2-benzylpropanoic acid1
37E[(1R)-1-amino-2-(cyclohexylamino)ethyl]phosphonic acid1
3DZ(2S)-2-[3-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid1
4SAtert-butyl [(1S)-1-(biphenyl-4-yl)-2-(hydroxyamino)-2-oxoethyl]carbamate1
4SYtert-butyl {(1S)-2-(hydroxyamino)-1-[4-(1-methyl-1H-pyrazol-4-yl)phenyl]-2-oxoethyl}carbamate1