T-group (topology)
11.1.3 Cu,Zn superoxide dismutase-like
Ligands and drugs
1,332
Member domains
918
with ligand contacts (≤ 4 Å)
68.9% of members
834
with DrugDomain annotations
62.6% of members
315
with a DrugBank compound
23.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 11.1.3 belongs to X-group 11 Immunoglobulin-like beta-sandwich, which binds 8.0 ligand superclasses per 20 proteins, broader than 58% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02956 | PS5 | Pentasulfide-Sulfur | 8 |
| DB03766 | PPI | Propanoic acid | 8 |
| DB03796 | PLM | Palmitic Acid | 6 |
| DB00515 | CPT | Cisplatin | 5 |
| DB18267 | HEM | Ferroheme | 4 |
| DB00134 | MET | Methionine | 2 |
| DB00151 | CYS | Cysteine | 2 |
| DB01593 | — | — | 2 |
| DB01629 | 5UD | 5-fluorouridine | 2 |
| DB14487 | — | — | 2 |
| DB14533 | — | — | 2 |
| DB00668 | ALE | Epinephrine | 1 |
| DB00988 | LDP | Dopamine | 1 |
| DB01064 | — | — | 1 |
| DB03382 | — | S-oxy-L-cysteine | 1 |
| DB03685 | U5P | Uridine monophosphate | 1 |
| DB03929 | DSN | D-Serine | 1 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 1 |
| DB05025 | — | — | 1 |
| DB09061 | — | Cannabidiol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 854 |
| CUmetal | COPPER (II) ION | 452 |
| CU1metal | COPPER (I) ION | 87 |
| CL | CHLORIDE ION | 38 |
| S4P | Dihydrogen tetrasulfide | 20 |
| CAmetal | CALCIUM ION | 19 |
| NAmetal | SODIUM ION | 15 |
| LQW | ~{N}-[(4-chlorophenyl)methyl]-2-selanyl-benzamide | 14 |
| 9JT | N-phenyl-2-selanylbenzamide | 12 |
| SCN | THIOCYANATE ION | 9 |
| 9XX | (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate | 8 |
| A1LYN | (2S)-decane-1,2,10-triol | 8 |
| PLM | PALMITIC ACID | 8 |
| PPI | PROPANOIC ACID | 8 |
| PS5 | PENTASULFIDE-SULFUR | 8 |
| LQN | 2-selanyl-~{N}-[3-[4-(trifluoromethyl)phenyl]phenyl]benzamide | 6 |
| LR2 | ~{N}-pyridin-2-yl-2-selanyl-benzamide | 6 |
| AZI | AZIDE ION | 5 |
| CPT | Cisplatin | 4 |
| D7Z | PtCl2(1(R),2(R)-DACH) | 4 |