ECOD
F-group (family)

11.12.1.1 Neur_chan_LBD

Open in classification tree →Pfam PF02931 →

Ligands and drugs

4,887
Member domains
2,484
with ligand contacts (≤ 4 Å)
50.8% of members
2,582
with DrugDomain annotations
52.8% of members
1,986
with a DrugBank compound
40.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 11.12.1.1 belongs to X-group 11 Immunoglobulin-like beta-sandwich, which binds 8.0 ligand superclasses per 20 proteins, broader than 58% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00141NAGN-Acetylglucosamine862
DB02530ABUgamma-Aminobutyric acid185
DB00145GLYGlycine133
DB00184NCTNicotine67
DB15954SY9Strychnine60
DB02777PLCDiundecyl Phosphatidyl Choline57
DB05137L0BLobeline38
DB08839SROSerotonin37
DB00898—Ethanol33
DB01956TAUTaurine33
DB05381HSMHistamine30
DB03054MBRBromoform29
DB01273QMRVarenicline26
DB03128ACHAcetylcholine26
DB07720EPJEpibatidine25
DB00411CCECarbamoylcholine16
DB00818PFLPropofol16
DB00889CWBGranisetron16
DB01567——16
DB08620TH4Thiacloprid16

Most frequently bound compounds

PDB ligandNameDomains in contact
NAG2-acetamido-2-deoxy-beta-D-glucopyranose747
CLCHLORIDE ION445
NAmetalSODIUM ION265
PLCDIUNDECYL PHOSPHATIDYL CHOLINE230
ABUGAMMA-AMINO-BUTANOIC ACID182
GLYGLYCINE132
NCT(S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE61
SY9STRYCHNINE60
L0BAlpha-Lobeline45
MGmetalMAGNESIUM ION44
CAmetalCALCIUM ION40
MLKMETHYLLYCACONITINE32
3CN3-AMINOPROPANE30
EPJEPIBATIDINE30
HSMHISTAMINE30
TAU2-AMINOETHANESULFONIC ACID30
SROSEROTONIN28
MRD(4R)-2-METHYLPENTANE-2,4-DIOL27
09P1-(5-ethoxypyridin-3-yl)-1,4-diazepane25
ACHACETYLCHOLINE25