X-group (possible homology)

1124 Mitochondrial complex I, KFYI subunit

Ligands and drugs

233
Member domains
97
with ligand contacts (≤ 4 Å)
41.6% of members
28
with DrugDomain annotations
12.0% of members
16
with a DrugBank compound
6.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

4
Proteins with classified ligands
1
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Lipids and lipid-like molecules40.49.11×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03429CDLTetrastearoyl cardiolipin13
DB04327PEEPhosphatidylethanolamine3

Most frequently bound compounds

PDB ligandNameDomains in contact
CDLCARDIOLIPIN64
3PE1,2-Distearoyl-sn-glycerophosphoethanolamine29
PLX(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL7
PLCDIUNDECYL PHOSPHATIDYL CHOLINE2
PC11,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE1
PEE1,2-dioleoyl-sn-glycero-3-phosphoethanolamine1
PX21,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE1