T-group (topology)
12.3.1 supersandwich
Ligands and drugs
3,724
Member domains
1,350
with ligand contacts (≤ 4 Å)
36.3% of members
1,300
with DrugDomain annotations
34.9% of members
782
with a DrugBank compound
21.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 12.3.1 belongs to X-group 12 Glycosyl hydrolase domain-like, which binds 6.5 ligand superclasses per 20 proteins, narrower than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 87 |
| DB02379 | BGC | Beta-D-Glucose | 45 |
| DB01862 | IPT | Isopropyl beta-D-thiogalactopyranoside | 33 |
| DB01885 | 149 | D-Galctopyranosyl-1-On | 32 |
| DB02178 | HY1 | Phenylacetaldehyde | 24 |
| DB11091 | PEO | Hydrogen peroxide | 22 |
| DB02228 | 2FG | 2-deoxy-2-fluoro-β-D-galactose | 20 |
| DB02034 | SWA | Tridolgosir | 14 |
| DB04382 | 2DG | 2-Deoxy-alpha-D-galactopyranose | 12 |
| DB09459 | TLA | L-tartaric acid | 9 |
| DB02294 | GTZ | (5R,6S,7S,8S)-5-hydroxymethyl-6,7,8-trihydroxy-tetrazolo[1,5-A]piperidine | 8 |
| DB02464 | ABN | Benzylamine | 6 |
| DB02742 | KIF | Kifunensine | 6 |
| DB04807 | XTG | 4-NITROPHENYL-(6-S-ALPHA-D-XYLOPYRANOSYL)-BETA-D-GLUCOPYRANOSIDE | 6 |
| DB01920 | 145 | 1-O-[O-Nitrophenyl]-Beta-D-Galactopyranose | 5 |
| DB03389 | XYS | alpha-D-Xylopyranose | 5 |
| DB04878 | VOG | Voglibose | 5 |
| DB00139 | SIN | Succinic acid | 4 |
| DB00491 | MIG | Miglitol | 4 |
| DB00536 | GAI | Guanidine | 4 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAmetal | SODIUM ION | 369 |
| CUmetal | COPPER (II) ION | 301 |
| CAmetal | CALCIUM ION | 166 |
| MGmetal | MAGNESIUM ION | 75 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 71 |
| CL | CHLORIDE ION | 63 |
| IPT | 1-methylethyl 1-thio-beta-D-galactopyranoside | 45 |
| BGC | beta-D-glucopyranose | 38 |
| HY1 | PHENYLACETALDEHYDE | 24 |
| PEO | HYDROGEN PEROXIDE | 22 |
| ZNmetal | ZINC ION | 22 |
| GAL | beta-D-galactopyranose | 21 |
| NImetal | NICKEL (II) ION | 20 |
| 149 | D-galactonolactone | 17 |
| MNmetal | MANGANESE (II) ION | 16 |
| MVL | (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL | 16 |
| Kmetal | POTASSIUM ION | 15 |
| XE | XENON | 14 |
| COmetal | COBALT (II) ION | 12 |
| PTQ | 2-phenylethyl 1-thio-beta-D-galactopyranoside | 12 |