X-group (possible homology)

130 LEM/SAP HeH motif-like

Ligands and drugs

1,513
Member domains
25
with ligand contacts (≤ 4 Å)
1.7% of members
18
with DrugDomain annotations
1.2% of members
5
with a DrugBank compound
0.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

4
Proteins with classified ligands
2
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Homogeneous non-metal compounds20.92.36×not tested
Homogeneous metal compounds31.91.55×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00277—Theophylline1
DB01593——1
DB02690—NU10251
DB03073—3-Methoxybenzamide1
DB03722—3,4-Dihydro-5-Methyl-Isoquinolinone1
DB04010—2-(3'-Methoxyphenyl) Benzimidazole-4-Carboxamide1
DB07096—6-AMINO-BENZO[DE]ISOQUINOLINE-1,3-DIONE1
DB14487——1
DB14533——1

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION14
CUmetalCOPPER (II) ION2
IODIODIDE ION1
IUMURANYL (VI) ION1
KmetalPOTASSIUM ION1