F-group (family)
140.1.1.5 Anticodon_1
Ligands and drugs
1,662
Member domains
45
with ligand contacts (≤ 4 Å)
2.7% of members
27
with DrugDomain annotations
1.6% of members
17
with a DrugBank compound
1.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 140.1.1.5 belongs to X-group 140 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases, which binds 6.8 ligand superclasses per 20 proteins, narrower than 63% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00410 | MRC | Mupirocin | 6 |
| DB02916 | LMS | [(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4-Dihydroxytetrahydro-2-Furanyl]Methyl Sulfamate | 3 |
| DB00167 | — | Isoleucine | 2 |
| DB00131 | AMP | Adenosine phosphate | 1 |
| DB00161 | — | Valine | 1 |
| DB01755 | ILA | N-[Isoleucinyl]-N'-[adenosyl]-diaminosufone | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MRC | MUPIROCIN | 8 |
| ILA | N-[ISOLEUCINYL]-N'-[ADENOSYL]-DIAMINOSUFONE | 6 |
| LMS | [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDRO-2-FURANYL]METHYL SULFAMATE | 4 |
| LSS | 5'-O-(L-leucylsulfamoyl)adenosine | 4 |
| VAA | N-[VALINYL]-N'-[ADENOSYL]-DIAMINOSUFONE | 4 |
| TAR | D(-)-TARTARIC ACID | 3 |
| GV6 | [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2S,3S)-2-azanyl-3-methyl-pentanoate | 2 |
| LImetal | LITHIUM ION | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| AMP | ADENOSINE MONOPHOSPHATE | 1 |
| CL | CHLORIDE ION | 1 |
| GVU | (2E,4S,5S,6E,8E)-10-[(2S,3R,6S,8R,9S)-3-butyl-9-methyl-2-[(1E,3E)-3-methyl-5-oxidanyl-5-oxidanylidene-penta-1,3-dienyl]-3-(4-oxidanyl-4-oxidanylidene-butanoyl)oxy-1,7-dioxaspiro[5.5]undecan-8-yl]-4,8-dimethyl-5-oxidanyl-deca-2,6,8-trienoic acid | 1 |
| IOD | IODIDE ION | 1 |
| TLA | L(+)-TARTARIC ACID | 1 |
| WN9 | [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2S)-2-azanyl-3-methyl-butanoate | 1 |