T-group (topology)
146.1.1 Di-copper centre-containing domain
Ligands and drugs
861
Member domains
399
with ligand contacts (≤ 4 Å)
46.3% of members
279
with DrugDomain annotations
32.4% of members
155
with a DrugBank compound
18.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 146.1.1 belongs to X-group 146 Di-copper centre-containing domain, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 47 |
| DB00135 | TYR | Tyrosine | 12 |
| DB01759 | KOJ | Kojic acid | 12 |
| DB01055 | MMS | Mimosine | 9 |
| DB03694 | URS | N-phenylthiourea | 8 |
| DB11085 | RCO | Resorcinol | 7 |
| DB09526 | HQE | Hydroquinone | 5 |
| DB01235 | DAH | Levodopa | 3 |
| DB09140 | OXY | Oxygen | 3 |
| DB11091 | PEO | Hydrogen peroxide | 3 |
| DB00145 | GLY | Glycine | 2 |
| DB16855 | YRL | Tyrosol | 2 |
| DB00157 | — | NADH | 1 |
| DB00548 | — | Azelaic acid | 1 |
| DB00600 | — | — | 1 |
| DB03967 | SDS | Dodecyl sulfate | 1 |
| DB11217 | — | Arbutin | 1 |
| DB11254 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CUmetal | COPPER (II) ION | 224 |
| CUO | CU2-O2 CLUSTER | 92 |
| ZNmetal | ZINC ION | 61 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 42 |
| O | OXYGEN ATOM | 18 |
| PER | PEROXIDE ION | 16 |
| CL | CHLORIDE ION | 15 |
| NAmetal | SODIUM ION | 15 |
| MAN | alpha-D-mannopyranose | 14 |
| 0TR | 2-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE | 12 |
| KOJ | 5-HYDROXY-2-(HYDROXYMETHYL)-4H-PYRAN-4-ONE | 12 |
| TYR | TYROSINE | 12 |
| MMS | MIMOSINE | 8 |
| URS | N-PHENYLTHIOUREA | 8 |
| MGmetal | MAGNESIUM ION | 7 |
| RCO | RESORCINOL | 7 |
| C2O | CU-O-CU LINKAGE | 6 |
| HOmetal | HOLMIUM ATOM | 6 |
| TEW | 6-tungstotellurate(VI) | 6 |
| TRP | TRYPTOPHAN | 6 |