H-group (homology)
2002.1 TIM barrels
Ligands and drugs
63,431
Member domains
19,801
with ligand contacts (≤ 4 Å)
31.2% of members
19,409
with DrugDomain annotations
30.6% of members
13,933
with a DrugBank compound
22.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2002.1 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03247 | FMN | Flavin mononucleotide | 1,161 |
| DB00141 | NAG | N-Acetylglucosamine | 599 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 489 |
| DB04566 | IMP | Inosinic Acid | 423 |
| DB00119 | PYR | Pyruvic acid | 281 |
| DB01819 | PEP | Phosphoenolpyruvate | 246 |
| DB00114 | PLP | Pyridoxal phosphate | 200 |
| DB02262 | ORO | Orotic acid | 183 |
| DB14128 | NAD | Nadide | 180 |
| DB00123 | LYS | Lysine | 164 |
| DB02379 | BGC | Beta-D-Glucose | 160 |
| DB03147 | FAD | Flavin adenine dinucleotide | 145 |
| DB04326 | 13P | Dihydroxyacetone phosphate | 125 |
| DB02726 | PGA | 2-Phosphoglycolic Acid | 122 |
| DB02890 | BMP | 6-hydroxyuridine-5'-phosphate | 114 |
| DB00171 | ATP | ATP | 113 |
| DB02338 | NDP | NADPH | 103 |
| DB09459 | TLA | L-tartaric acid | 92 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 86 |
| DB04551 | FBP | beta-D-fructofuranose 1,6-bisphosphate | 83 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 3,798 |
| ZNmetal | ZINC ION | 1,997 |
| CL | CHLORIDE ION | 1,727 |
| NAmetal | SODIUM ION | 1,280 |
| CAmetal | CALCIUM ION | 1,273 |
| FMN | FLAVIN MONONUCLEOTIDE | 1,157 |
| Kmetal | POTASSIUM ION | 899 |
| MNmetal | MANGANESE (II) ION | 887 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 572 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 497 |
| CAP | 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE | 428 |
| IMP | INOSINIC ACID | 423 |
| COmetal | COBALT (II) ION | 292 |
| PYR | PYRUVIC ACID | 278 |
| PEP | PHOSPHOENOLPYRUVATE | 245 |
| NImetal | NICKEL (II) ION | 234 |
| SF4 | IRON/SULFUR CLUSTER | 217 |
| PLP | PYRIDOXAL-5'-PHOSPHATE | 193 |
| FEmetal | FE (III) ION | 183 |
| ORO | OROTIC ACID | 183 |