T-group (topology)

2003.1.10 PreATP-grasp domain

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Ligands and drugs

3,846

Member domains

500

with ligand contacts (≤ 4 Å)

13.0% of members

444

with DrugDomain annotations

11.5% of members

293

with a DrugBank compound

7.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2003.1.10 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB08837	NET	Tetraethylammonium	40
DB00171	ATP	ATP	36
DB03434	MPO	3-(N-morpholino)propanesulfonic acid	14
DB01786	DAL	D-Alanine	12
DB03408	3GC	gamma-Glutamylcysteine	10
DB01992	COA	Coenzyme A	9
DB00121	—	Biotin	8
DB00143	GSH	Glutathione	8
DB16833	ADP	Adenosine disphosphate	7
DB00142	GLU	Glutamic acid	6
DB02859	S1A	Soraphen A	6
DB14981	IHP	Phytic acid	6
DB01700	AMZ	AICA ribonucleotide	4
DB02236	GAR	Glycinamide Ribonucleotide	4
DB00131	AMP	Adenosine phosphate	3
DB00151	CYS	Cysteine	3
DB00145	GLY	Glycine	2
DB02930	AGS	Adenosine 5'-[gamma-thio]triphosphate	2
DB03568	BUA	Butyric Acid	2
DB06775	—	—	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
CL	CHLORIDE ION	104
Kmetal	POTASSIUM ION	59
MGmetal	MAGNESIUM ION	52
NAmetal	SODIUM ION	41
NET	TETRAETHYLAMMONIUM ION	40
DAL	D-ALANINE	32
ATP	ADENOSINE-5'-TRIPHOSPHATE	27
BTN	BIOTIN	24
ACO	ACETYL COENZYME *A	19
ADP	ADENOSINE-5'-DIPHOSPHATE	16
MPO	3[N-MORPHOLINO]PROPANE SULFONIC ACID	14
3GC	GAMMA-GLUTAMYLCYSTEINE	10
2TI	(2~{S})-2-[[[(3~{R})-3-acetamido-4-(ethylamino)-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid	8
COA	COENZYME A	8
DS0	[(4R)-4-azanyl-4,5-dihydro-1,2-oxazol-3-yl] dihydrogen phosphate	8
GSH	Glutathione	8
I7P	(1r,2R,3S,4s,5R,6S)-2,3,4,5,6-pentakis(phosphonooxy)cyclohexyl trihydrogen diphosphate	8
S3A	(2~{S})-2-[[[(3~{R})-3-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid	8
AMP	ADENOSINE MONOPHOSPHATE	7
RZP	(2~{S})-2-[[[(1~{R})-1-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid	7