T-group (topology)

2003.1.2 FAD/NAD(P)-binding domain

Open in classification tree →

Ligands and drugs

12,732

Member domains

5,408

with ligand contacts (≤ 4 Å)

42.5% of members

4,387

with DrugDomain annotations

34.5% of members

4,262

with a DrugBank compound

33.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2003.1.2 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB03147	FAD	Flavin adenine dinucleotide	3,859
DB03461	NAP	Nicotinamide adenine dinucleotide phosphate	412
DB02338	NDP	NADPH	138
DB14128	NAD	Nadide	123
DB01992	COA	Coenzyme A	75
DB00141	NAG	N-Acetylglucosamine	64
DB00157	NAI	NADH	61
DB00129	ORN	Ornithine	47
DB09140	OXY	Oxygen	35
DB09353	PS9	Octasulfur	34
DB02643	C15	N-Dodecyl-N,N-Dimethyl-3-Ammonio-1-Propanesulfonate	32
DB03435	UDP	Uridine-5'-Diphosphate	32
DB01677	FUM	Fumaric acid	29
DB00150	TRP	Tryptophan	28
DB03501	GDU	Galactose-uridine-5'-diphosphate	28
DB04242	PHB	4-hydroxybenzoic acid	28
DB03343	TEO	Malate Like Intermediate	27
DB03345	BME	Mercaptoethanol	26
DB16833	ADP	Adenosine disphosphate	25
DB02637	OAA	Oxaloacetate Ion	23

Most frequently bound compounds

PDB ligand	Name	Domains in contact
FAD	FLAVIN-ADENINE DINUCLEOTIDE	4,676
NAP	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	473
CL	CHLORIDE ION	408
FDA	DIHYDROFLAVINE-ADENINE DINUCLEOTIDE	229
NAD	NICOTINAMIDE-ADENINE-DINUCLEOTIDE	174
NAmetal	SODIUM ION	167
NDP	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	151
MGmetal	MAGNESIUM ION	131
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose	86
BR	BROMIDE ION	84
COA	COENZYME A	75
GLY	GLYCINE	67
SF4	IRON/SULFUR CLUSTER	65
H2S	HYDROSULFURIC ACID	59
CAmetal	CALCIUM ION	57
NAI	1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE	56
ORN	L-ornithine	47
Kmetal	POTASSIUM ION	46
OXY	OXYGEN MOLECULE	41
C15	N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE	40