F-group (family)
2003.1.5.2 RrnaAD
Ligands and drugs
794
Member domains
38
with ligand contacts (≤ 4 Å)
4.8% of members
20
with DrugDomain annotations
2.5% of members
16
with a DrugBank compound
2.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2003.1.5.2 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00118 | SAM | Ademetionine | 5 |
| DB02282 | MTA | 5'-S-methyl-5'-thioadenosine | 4 |
| DB00139 | SIN | Succinic acid | 1 |
| DB00640 | ADN | Adenosine | 1 |
| DB01752 | SAH | S-adenosyl-L-homocysteine | 1 |
| DB01910 | SFG | Sinefungin | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 15 |
| MTA | 5'-DEOXY-5'-METHYLTHIOADENOSINE | 13 |
| SO3 | SULFITE ION | 12 |
| ARG | ARGININE | 7 |
| SAM | S-ADENOSYLMETHIONINE | 5 |
| SFG | SINEFUNGIN | 5 |
| CL | CHLORIDE ION | 4 |
| ADN | ADENOSINE | 3 |
| SAH | S-ADENOSYL-L-HOMOCYSTEINE | 2 |
| SIN | SUCCINIC ACID | 2 |
| IOD | IODIDE ION | 1 |
| XE | XENON | 1 |