T-group (topology)
2003.1.9 Activating enzymes of the ubiquitin-like proteins
Ligands and drugs
934
Member domains
347
with ligand contacts (≤ 4 Å)
37.2% of members
257
with DrugDomain annotations
27.5% of members
181
with a DrugBank compound
19.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2003.1.9 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00171 | ATP | ATP | 90 |
| DB00131 | AMP | Adenosine phosphate | 30 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 4 |
| DB11759 | B39 | Pevonedistat | 4 |
| DB15013 | 61T | TAK-243 | 4 |
| DB16833 | ADP | Adenosine disphosphate | 4 |
| DB03345 | BME | Mercaptoethanol | 2 |
| DB14981 | IHP | Phytic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 149 |
| ZNmetal | ZINC ION | 140 |
| MGmetal | MAGNESIUM ION | 75 |
| AMP | ADENOSINE MONOPHOSPHATE | 53 |
| A1AIV | 4-aminobutanenitrile | 22 |
| CL | CHLORIDE ION | 19 |
| NAmetal | SODIUM ION | 15 |
| POP | PYROPHOSPHATE 2- | 14 |
| IHP | INOSITOL HEXAKISPHOSPHATE | 12 |
| CAmetal | CALCIUM ION | 10 |
| Kmetal | POTASSIUM ION | 8 |
| 61T | [(1~{R},2~{R},3~{S},4~{R})-2,3-bis(oxidanyl)-4-[[2-[3-(trifluoromethylsulfanyl)phenyl]pyrazolo[1,5-a]pyrimidin-7-yl]amino]cyclopentyl]methyl sulfamate | 4 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 4 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 4 |
| B39 | [(1S,2S,4R)-4-{4-[(1S)-2,3-dihydro-1H-inden-1-ylamino]-7H-pyrrolo[2,3-d]pyrimidin-7-yl}-2-hydroxycyclopentyl]methyl sulfamate | 4 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 3 |
| FEG | 5'-O-[(S)-{[2-(carboxymethyl)-6-hydroxy-3,5-dimethylpyridin-4-yl]oxy}(hydroxy)phosphoryl]guanosine | 3 |
| JZU | 5'-deoxy-5'-(sulfamoylamino)adenosine | 3 |
| VMX | 5'-{[(3-aminopropyl)sulfonyl]amino}-5'-deoxyadenosine | 3 |
| 6O2 | [(2~{R},3~{S},4~{R},5~{R})-5-[6-[(3-ethynylphenyl)amino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl sulfamate | 2 |