F-group (family)
2003.6.1.5 Phos_pyr_kin
Ligands and drugs
372
Member domains
135
with ligand contacts (≤ 4 Å)
36.3% of members
131
with DrugDomain annotations
35.2% of members
123
with a DrugBank compound
33.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2003.6.1.5 belongs to X-group 2003 Rossmann-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 78% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 32 |
| DB00147 | PXL | Pyridoxal | 18 |
| DB00114 | PLP | Pyridoxal phosphate | 15 |
| DB00171 | ATP | ATP | 15 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 10 |
| DB02930 | AGS | Adenosine 5'-[gamma-thio]triphosphate | 8 |
| DB00165 | UEG | Pyridoxine | 7 |
| DB03345 | BME | Mercaptoethanol | 4 |
| DB11673 | PXM | Pyridoxamine | 3 |
| DB00277 | TEP | Theophylline | 2 |
| DB02022 | HMH | 4-Amino-5-Hydroxymethyl-2-Methylpyrimidine | 2 |
| DB04770 | R6C | O6-(R)-ROSCOVITINE, R-2-(6-BENZYLOXY-9-ISOPROPYL-9H-PURIN-2-YLAMINO)-BUTAN-1-OL | 2 |
| DB04776 | RMC | (2R)-2-({6-[benzyl(methyl)amino]-9-isopropyl-9H-purin-2-yl}amino)butan-1-ol | 2 |
| DB03309 | NHE | N-cyclohexyltaurine | 1 |
| DB06195 | RRC | Seliciclib | 1 |
| DB09274 | D95 | Artesunate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ADP | ADENOSINE-5'-DIPHOSPHATE | 32 |
| MGmetal | MAGNESIUM ION | 24 |
| NAmetal | SODIUM ION | 18 |
| PXL | 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE | 18 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 15 |
| PLP | PYRIDOXAL-5'-PHOSPHATE | 15 |
| ZNmetal | ZINC ION | 14 |
| CL | CHLORIDE ION | 12 |
| ACP | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | 9 |
| AGS | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | 8 |
| CAmetal | CALCIUM ION | 8 |
| UEG | 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol | 6 |
| BME | BETA-MERCAPTOETHANOL | 5 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 4 |
| GT0 | 5-(hydroxymethyl)-4-(methoxymethyl)-2-methylpyridin-3-ol | 4 |
| HMH | 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE | 3 |
| Kmetal | POTASSIUM ION | 3 |
| PXM | 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL | 3 |
| GT1 | [5-hydroxy-4-(methoxymethyl)-6-methylpyridin-3-yl]methyl dihydrogen phosphate | 2 |
| LU2 | 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one | 2 |