F-group (family)
2005.1.1.12 tRNA-synt_1e
Ligands and drugs
886
Member domains
38
with ligand contacts (≤ 4 Å)
4.3% of members
16
with DrugDomain annotations
1.8% of members
8
with a DrugBank compound
0.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2005.1.1.12 belongs to X-group 2005 HUP domain-like, which binds 8.2 ligand superclasses per 20 proteins, broader than 61% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00151 | CYS | Cysteine | 4 |
| DB00131 | AMP | Adenosine phosphate | 2 |
| DB02684 | 5CA | 5'-O-(L-Cysteinylsulfamoyl)adenosine | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 38 |
| NAmetal | SODIUM ION | 20 |
| CL | CHLORIDE ION | 7 |
| AMP | ADENOSINE MONOPHOSPHATE | 6 |
| CYS | CYSTEINE | 6 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 4 |
| CAmetal | CALCIUM ION | 3 |
| 5CA | 5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE | 2 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 2 |
| A1CYZ | 5'-O-[(R)-{[(2R)-2-amino-3-sulfanylpropanoyl]oxy}(hydroxy)phosphoryl]adenosine | 2 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 2 |
| GSU | O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE | 2 |
| LMS | [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDRO-2-FURANYL]METHYL SULFAMATE | 2 |
| PG5 | 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE | 2 |
| XG8 | N-[(3M)-3-(thiophen-2-yl)benzene-1-sulfonyl]-L-cysteinamide | 1 |
| XGC | N-[(3M)-3-(6-methoxypyridin-3-yl)benzene-1-sulfonyl]-L-cysteinamide | 1 |