ECOD
F-group (family)

2005.1.1.18 NAD_synthase

Open in classification tree →Pfam PF02540 →

Ligands and drugs

1,106
Member domains
209
with ligand contacts (≤ 4 Å)
18.9% of members
194
with DrugDomain annotations
17.5% of members
186
with a DrugBank compound
16.8% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2005.1.1.18 belongs to X-group 2005 HUP domain-like, which binds 8.2 ligand superclasses per 20 proteins, broader than 61% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB04099DNDDeamido-Nad+25
DB00131AMPAdenosine phosphate22
DB14128NADNadide17
DB00171ATPATP15
DB02309XMP5-monophosphate-9-beta-D-ribofuranosyl xanthine8
DB02596APCalpha,beta-Methyleneadenosine 5'-triphosphate7
DB01992COACoenzyme A6
DB03227NMNNicotinamide Mononucleotide6
DB00142GLUGlutamic acid2
DB16833ADPAdenosine disphosphate2
DB00130GLNL-Glutamine1
DB02175MLAMalonic acid1

Most frequently bound compounds

PDB ligandNameDomains in contact
MGmetalMAGNESIUM ION28
AMPADENOSINE MONOPHOSPHATE23
POPPYROPHOSPHATE 2-20
CLCHLORIDE ION19
NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE17
ATPADENOSINE-5'-TRIPHOSPHATE15
SF4IRON/SULFUR CLUSTER14
CSmetalCESIUM ION12
XMPXANTHOSINE-5'-MONOPHOSPHATE10
DNDNICOTINIC ACID ADENINE DINUCLEOTIDE9
APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER7
COACOENZYME A6
NMNBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE6
NImetalNICKEL (II) ION5
SFH5'-O-[(pyridine-3-carbonyl)sulfamoyl]adenosine4
CAmetalCALCIUM ION3
ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE2
ADPADENOSINE-5'-DIPHOSPHATE2
ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER2
BMEBETA-MERCAPTOETHANOL2