F-group (family)
2005.1.1.29 tRNA-synt_1g
Ligands and drugs
575
Member domains
45
with ligand contacts (≤ 4 Å)
7.8% of members
36
with DrugDomain annotations
6.3% of members
32
with a DrugBank compound
5.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2005.1.1.29 belongs to X-group 2005 HUP domain-like, which binds 8.2 ligand superclasses per 20 proteins, broader than 61% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00134 | MET | Methionine | 11 |
| DB00640 | ADN | Adenosine | 3 |
| DB02229 | MSP | 5'-O-[(L-methionyl)-sulphamoyl]adenosine | 3 |
| DB00171 | ATP | ATP | 2 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 2 |
| DB02831 | 2HP | Dihydrogenphosphate | 2 |
| DB11142 | MSE | Selenomethionine | 2 |
| DB02151 | MPH | Methionine Phosphonate | 1 |
| DB03799 | MF3 | Trifluoromethionine | 1 |
| DB03816 | 2FM | Difluoromethionine | 1 |
| DB04015 | MPJ | Methionine Phosphinate | 1 |
| DB12262 | U81 | CRS-3123 | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MET | METHIONINE | 12 |
| B3M | (3R)-3-amino-5-(methylsulfanyl)pentanoic acid | 4 |
| GSU | O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE | 4 |
| ADN | ADENOSINE | 3 |
| MSP | 5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE | 3 |
| 2HP | DIHYDROGENPHOSPHATE ION | 2 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 2 |
| CXS | 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID | 2 |
| MSE | SELENOMETHIONINE | 2 |
| NAmetal | SODIUM ION | 2 |
| ZNmetal | ZINC ION | 2 |
| 29I | (phenylmethyl) N-[(2R)-2-[2-(4-bromanyl-3-oxidanyl-phenyl)-5-(methylcarbamoyl)benzimidazol-1-yl]-2-(3,4-dimethoxyphenyl)ethyl]carbamate | 1 |
| 2FM | S-(DIFLUOROMETHYL)HOMOCYSTEINE | 1 |
| 415 | 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea | 1 |
| A1MAL | [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-4-methylsulfanyl-butanoyl]sulfamate | 1 |
| MDS | N-[METHIONYL]-N'-[ADENOSYL]-DIAMINOSULFONE | 1 |
| MF3 | 2-AMINO-4-TRIFLUOROMETHYLSULFANYL-BUTYRIC ACID | 1 |
| MOD | L-METHIONYL ADENYLATE | 1 |
| MPH | (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHONIC ACID | 1 |
| MPJ | (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID | 1 |