T-group (topology)
2006.1.5 Arginase/deacetylase
Ligands and drugs
2,306
Member domains
1,500
with ligand contacts (≤ 4 Å)
65.0% of members
1,374
with DrugDomain annotations
59.6% of members
794
with a DrugBank compound
34.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2006.1.5 belongs to X-group 2006 HAD domain-like, which binds 9.7 ligand superclasses per 20 proteins, broader than 91% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02565 | B3N | 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide | 53 |
| DB00129 | ORN | Ornithine | 44 |
| DB02546 | SHH | Vorinostat | 33 |
| DB03345 | BME | Mercaptoethanol | 33 |
| DB01983 | ABH | 2(S)-Amino-6-Boronohexanoic Acid | 29 |
| DB00536 | GAI | Guanidine | 27 |
| DB04297 | TSN | Trichostatin A | 27 |
| DB03309 | NHE | N-cyclohexyltaurine | 24 |
| DB03731 | S2C | S-2-(Boronoethyl)-L-Cysteine | 21 |
| DB00123 | LYS | Lysine | 17 |
| DB14981 | IHP | Phytic acid | 13 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 12 |
| DB08168 | MCM | Coumarin 120 | 12 |
| DB03144 | HAR | N(5)-[(hydroxyamino)(imino)methyl]-L-ornithine | 11 |
| DB03260 | 16D | Hexamethylene diamine | 11 |
| DB00125 | ARG | Arginine | 10 |
| DB02381 | NNH | nor-NOHA | 10 |
| DB03904 | URE | Urea | 10 |
| DB00161 | VAL | Valine | 7 |
| DB12985 | GOK | Quisinostat | 7 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 844 |
| Kmetal | POTASSIUM ION | 657 |
| MNmetal | MANGANESE (II) ION | 574 |
| NAmetal | SODIUM ION | 162 |
| CAmetal | CALCIUM ION | 111 |
| B3N | 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide | 53 |
| MGmetal | MAGNESIUM ION | 51 |
| ORN | L-ornithine | 48 |
| CL | CHLORIDE ION | 46 |
| SHH | OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE | 35 |
| BME | BETA-MERCAPTOETHANOL | 33 |
| ABH | 2(S)-AMINO-6-BORONOHEXANOIC ACID | 29 |
| TSN | TRICHOSTATIN A | 28 |
| GAI | GUANIDINE | 27 |
| NImetal | NICKEL (II) ION | 27 |
| S2C | S-2-(BORONOETHYL)-L-CYSTEINE | 21 |
| BEN | BENZAMIDINE | 18 |
| NHE | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | 18 |
| IOD | IODIDE ION | 14 |
| COmetal | COBALT (II) ION | 13 |