F-group (family)
2007.1.3.3 Oxidored_q6
Ligands and drugs
1,541
Member domains
665
with ligand contacts (≤ 4 Å)
43.2% of members
439
with DrugDomain annotations
28.5% of members
214
with a DrugBank compound
13.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.1.3.3 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02338 | NDP | NADPH | 109 |
| DB04327 | PEE | Phosphatidylethanolamine | 50 |
| DB11457 | 970 | Rotenone | 9 |
| DB07640 | DCQ | 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione | 8 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 7 |
| DB08689 | UQ1 | Ubiquinone Q1 | 7 |
| DB02777 | PLC | Diundecyl Phosphatidyl Choline | 6 |
| DB00145 | GLY | Glycine | 5 |
| DB03429 | CDL | Tetrastearoyl cardiolipin | 5 |
| DB09140 | OXY | Oxygen | 4 |
| DB18267 | HEM | Ferroheme | 4 |
| DB03570 | 144 | Tris-Hydroxymethyl-Methyl-Ammonium | 3 |
| DB09270 | U10 | Ubidecarenone | 3 |
| DB00157 | — | NADH | 1 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 1 |
| DB02643 | C15 | N-Dodecyl-N,N-Dimethyl-3-Ammonio-1-Propanesulfonate | 1 |
| DB02659 | CHD | Cholic Acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 567 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 194 |
| PC1 | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | 123 |
| CL | CHLORIDE ION | 77 |
| PLX | (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL | 60 |
| PEE | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | 55 |
| SF3 | FE4-S3 CLUSTER | 51 |
| 3PE | 1,2-Distearoyl-sn-glycerophosphoethanolamine | 49 |
| UQ | Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer | 47 |
| UQ9 | Ubiquinone-9 | 34 |
| F4S | FE4-S3 CLUSTER | 24 |
| UQ1 | UBIQUINONE-1 | 21 |
| DCQ | 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione | 20 |
| F3S | FE3-S4 CLUSTER | 20 |
| 6ML | oxygen-damaged SF4 | 19 |
| PLC | DIUNDECYL PHOSPHATIDYL CHOLINE | 18 |
| U10 | UBIQUINONE-10 | 18 |
| 970 | (2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrofuro[2',3':7,8][1]benzopyrano[2,3-c][1]benzopyran-6(6aH)-one | 13 |
| CAmetal | CALCIUM ION | 12 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 8 |