F-group (family)
2007.1.6.4 Shikimate_dh_N
Ligands and drugs
648
Member domains
83
with ligand contacts (≤ 4 Å)
12.8% of members
81
with DrugDomain annotations
12.5% of members
47
with a DrugBank compound
7.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.1.6.4 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 12 |
| DB14128 | NAD | Nadide | 12 |
| DB02338 | NDP | NADPH | 3 |
| DB00157 | NAI | NADH | 2 |
| DB02184 | DTV | D-1,4-dithiothreitol | 1 |
| DB02363 | ATR | 2'-Monophosphoadenosine-5'-Diphosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SKM | (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID | 33 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 10 |
| DHK | 3-DEHYDROSHIKIMATE | 4 |
| ACE | ACETYL GROUP | 3 |
| CL | CHLORIDE ION | 3 |
| NAmetal | SODIUM ION | 3 |
| NAD | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 3 |
| BR | BROMIDE ION | 2 |
| HGmetal | MERCURY (II) ION | 2 |
| MNmetal | MANGANESE (II) ION | 2 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 2 |
| QIC | (1S,3R,4S,5R)-1,3,4,5-tetrahydroxycyclohexanecarboxylic acid | 2 |
| ZNmetal | ZINC ION | 2 |
| ATR | 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE | 1 |
| DTV | (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL | 1 |