T-group (topology)
2007.1.7 Rossmann-like domain in dehydroquinate synthase-like enzymes
Ligands and drugs
1,113
Member domains
206
with ligand contacts (≤ 4 Å)
18.5% of members
188
with DrugDomain annotations
16.9% of members
163
with a DrugBank compound
14.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.1.7 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB14128 | NAD | Nadide | 87 |
| DB02592 | CRB | Carbaphosphonate | 18 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 14 |
| DB00157 | NAI | NADH | 9 |
| DB02338 | NDP | NADPH | 6 |
| DB16833 | ADP | Adenosine disphosphate | 6 |
| DB02319 | NZQ | 5,6-dihydroxy-NADP | 4 |
| DB00145 | GLY | Glycine | 3 |
| DB00142 | GLU | Glutamic acid | 2 |
| DB02363 | ATR | 2'-Monophosphoadenosine-5'-Diphosphate | 2 |
| DB04349 | PGO | (S)-propane-1,2-diol | 2 |
| DB00160 | ALA | Alanine | 1 |
| DB04160 | PPV | Pyrophosphoric acid | 1 |
| DB11326 | BO3 | Boric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAD | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 93 |
| ZNmetal | ZINC ION | 77 |
| CL | CHLORIDE ION | 36 |
| CRB | [1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID | 18 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 14 |
| APR | ADENOSINE-5-DIPHOSPHORIBOSE | 13 |
| MGmetal | MAGNESIUM ION | 10 |
| NAI | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | 10 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 7 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 6 |
| FEmetal | FE (III) ION | 5 |
| 7LH | (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid | 4 |
| COmetal | COBALT (II) ION | 4 |
| E9I | 2-(3,4-dimethoxyphenyl)ethanamide | 4 |
| GLY | GLYCINE | 4 |
| NZQ | 5,6-DIHYDROXY-NADP | 4 |
| CAmetal | CALCIUM ION | 3 |
| Kmetal | POTASSIUM ION | 3 |
| 1BO | 1-BUTANOL | 2 |
| ATR | 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE | 2 |