ECOD
F-group (family)

2007.12.1.1 Glyco_hydro_3_C

Open in classification tree →Pfam PF01915 →

Ligands and drugs

533
Member domains
235
with ligand contacts (≤ 4 Å)
44.1% of members
182
with DrugDomain annotations
34.1% of members
167
with a DrugBank compound
31.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2007.12.1.1 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00141NAGN-Acetylglucosamine94
DB02379BGCBeta-D-Glucose45
DB03206NOJDuvoglustat4
DB03990LAM4'-nitrophenyl-3i-thiolaminaritrioside4
DB04545IFMAfegostat4
DB04564LGCGluconolactone4
DB09419XLSXylose4
DB01816CTSCastanospermine2
DB02862IDDGluco-Phenylimidazole2
DB04447DTT1,4-Dithiothreitol2
DB04658CGBCalystegine B22
DB01638SORSorbitol1
DB04282G2F2-deoxy-2-fluoro-α-D-glucose1
DB04712IDEANILINOMETHYL GLUCO-PHENYLIMIDAZOLE1
DB08558SOG2-HYDROXYMETHYL-6-OCTYLSULFANYL-TETRAHYDRO-PYRAN-3,4,5-TRIOL1
DB13178INSInositol1

Most frequently bound compounds

PDB ligandNameDomains in contact
NAG2-acetamido-2-deoxy-beta-D-glucopyranose96
BGCbeta-D-glucopyranose56
MRD(4R)-2-METHYLPENTANE-2,4-DIOL14
ZNmetalZINC ION14
BKRDeacetyltaxol12
NAmetalSODIUM ION7
XYPbeta-D-xylopyranose7
CAmetalCALCIUM ION6
GLCalpha-D-glucopyranose6
MGmetalMAGNESIUM ION5
NOJ1-DEOXYNOJIRIMYCIN5
CLCHLORIDE ION4
IFM5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE4
LAM4'-NITROPHENYL-S-(BETA-D-GLUCOPYRANOSYL)-(1-3)-(3-THIO-BETA-D-GLUCOPYRANOSYL)-(1-3)-BETA-D-GLUCOPYRANOSIDE4
LGCD-glucono-1,5-lactone4
XLSD-xylose4
XYZbeta-D-xylofuranose4
BMAbeta-D-mannopyranose3
BRBROMIDE ION3
C3G4-nitrophenyl beta-D-glucopyranosiduronic acid3