F-group (family)
2007.2.1.1 Flavodoxin_1
Ligands and drugs
772
Member domains
306
with ligand contacts (≤ 4 Å)
39.6% of members
299
with DrugDomain annotations
38.7% of members
288
with a DrugBank compound
37.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.2.1.1 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03247 | FMN | Flavin mononucleotide | 260 |
| DB03147 | FAD | Flavin adenine dinucleotide | 14 |
| DB00155 | — | Citrulline | 2 |
| DB02027 | — | N-{(4S)-4-Amino-5-[(2-aminoethyl)amino]pentyl}-N'-nitroguanidine | 2 |
| DB02044 | — | N-[3-(aminomethyl)benzyl]acetamidine | 2 |
| DB03707 | — | S-Ethyl-N-Phenyl-Isothiourea | 2 |
| DB04223 | — | Nitroarginine | 2 |
| DB08018 | — | N-{(3S,4S)-4-[(6-AMINO-4-METHYLPYRIDIN-2-YL)METHYL]PYRROLIDIN-3-YL}-N'-(4-CHLOROBENZYL)ETHANE-1,2-DIAMINE | 2 |
| DB08019 | — | N-{(3R,4S)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-(3-chlorobenzyl)ethane-1,2-diamine | 2 |
| DB00115 | — | Cyanocobalamin | 1 |
| DB00134 | — | Methionine | 1 |
| DB00435 | — | — | 1 |
| DB00843 | — | — | 1 |
| DB01110 | — | — | 1 |
| DB01221 | — | — | 1 |
| DB01686 | — | N,N-dimethylarginine | 1 |
| DB01833 | — | Canavanine | 1 |
| DB01942 | — | Formic acid | 1 |
| DB02048 | — | 1,2,4-Triazole-Carboxamidine | 1 |
| DB02141 | — | S,S'-(1,4-Phenylene-Bis(1,2-Ethanediyl))Bis-Isothiourea | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| FMN | FLAVIN MONONUCLEOTIDE | 268 |
| CL | CHLORIDE ION | 27 |
| CAmetal | CALCIUM ION | 15 |
| ZNmetal | ZINC ION | 9 |
| HEZ | HEXANE-1,6-DIOL | 8 |
| NAmetal | SODIUM ION | 6 |
| FEmetal | FE (III) ION | 5 |
| MGmetal | MAGNESIUM ION | 4 |
| 7MT | Tb-Xo4 | 3 |
| CDmetal | CADMIUM ION | 3 |
| FAD | FLAVIN-ADENINE DINUCLEOTIDE | 3 |
| GLC | alpha-D-glucopyranose | 3 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 3 |
| TBmetal | TERBIUM(III) ION | 2 |
| BEN | BENZAMIDINE | 1 |
| FNR | 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL | 1 |
| IC3 | [2-(5-amino-4-cyano-1H-pyrazol-1-yl)-5-(trifluoromethyl)phenyl](hydroxy)oxoammonium | 1 |
| MNmetal | MANGANESE (II) ION | 1 |
| P6G | HEXAETHYLENE GLYCOL | 1 |