T-group (topology)
2007.2.5 Rhodanese/Cell cycle control phosphatase
Ligands and drugs
1,791
Member domains
208
with ligand contacts (≤ 4 Å)
11.6% of members
206
with DrugDomain annotations
11.5% of members
111
with a DrugBank compound
6.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2007.2.5 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01992 | COA | Coenzyme A | 18 |
| DB00119 | PYR | Pyruvic acid | 6 |
| DB03345 | BME | Mercaptoethanol | 4 |
| DB01842 | PAP | 3'-Phosphate-Adenosine-5'-Diphosphate | 2 |
| DB02761 | — | S-Mercaptocysteine | 2 |
| DB02956 | PS5 | Pentasulfide-Sulfur | 2 |
| DB02774 | PDO | 1,3-Propanediol | 1 |
| DB03434 | MPO | 3-(N-morpholino)propanesulfonic acid | 1 |
| DB03661 | — | L-cysteic acid | 1 |
| DB04053 | PO2 | Hypophosphite | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 66 |
| MGmetal | MAGNESIUM ION | 44 |
| NAmetal | SODIUM ION | 26 |
| COA | COENZYME A | 18 |
| AVJ | N,N,N-trimethyl-histidine | 16 |
| BR | BROMIDE ION | 12 |
| ZNmetal | ZINC ION | 12 |
| LW8 | trimethyl-[(2S)-1-oxidanyl-1-oxidanylidene-3-(2-sulfanylidene-1,3-dihydroimidazol-4-yl)propan-2-yl]azanium | 8 |
| MNmetal | MANGANESE (II) ION | 6 |
| PYR | PYRUVIC ACID | 6 |
| SO3 | SULFITE ION | 5 |
| 7N3 | 2-[2-[(4-oxidanylidene-3~{H}-quinazolin-2-yl)sulfanyl]ethanoylamino]thiophene-3-carboxamide | 4 |
| 7NC | 4-methyl-2-(2-naphthalen-1-yl-2-oxidanylidene-ethyl)sulfanyl-1~{H}-pyrimidin-6-one | 4 |
| BME | BETA-MERCAPTOETHANOL | 4 |
| DV6 | [(2S)-3-[(2S)-2-(disulfanyl)-2,3-dihydro-1H-imidazol-4-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]-trimethyl-azanium | 4 |
| PDO | 1,3-PROPANDIOL | 3 |
| IOD | IODIDE ION | 2 |
| LPB | 5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid | 2 |
| PAP | 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE | 2 |
| PS5 | PENTASULFIDE-SULFUR | 2 |