F-group (family)
2011.1.1.8 Peptidase_M28
Ligands and drugs
854
Member domains
401
with ligand contacts (≤ 4 Å)
47.0% of members
294
with DrugDomain annotations
34.4% of members
235
with a DrugBank compound
27.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2011.1.1.8 belongs to X-group 2011 Phosphorylase/hydrolase-like, which binds 8.3 ligand superclasses per 20 proteins, broader than 62% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 107 |
| DB00149 | LEU | Leucine | 7 |
| DB00142 | GLU | Glutamic acid | 6 |
| DB03424 | BES | Ubenimex | 4 |
| DB04581 | 1BN | 1-benzylimidazole | 4 |
| DB04622 | AHN | N-acetylhistamine | 4 |
| DB02386 | PLU | Leucine Phosphonic Acid | 3 |
| DB02999 | QUS | Quisqualic acid | 3 |
| DB00134 | MET | Methionine | 2 |
| DB00135 | TYR | Tyrosine | 2 |
| DB02591 | DMD | 5,6-Dimethylbenzimidazole | 2 |
| DB03088 | PCA | Pidolic acid | 2 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 2 |
| DB04636 | BGT | Glutamine t-butyl ester | 2 |
| DB00120 | PHE | Phenylalanine | 1 |
| DB00128 | ASP | Aspartic acid | 1 |
| DB00130 | GLN | L-Glutamine | 1 |
| DB00150 | TRP | Tryptophan | 1 |
| DB00161 | VAL | Valine | 1 |
| DB00167 | ILE | Isoleucine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 343 |
| CAmetal | CALCIUM ION | 130 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 107 |
| CL | CHLORIDE ION | 105 |
| NAmetal | SODIUM ION | 21 |
| PBD | 1-(3,4-dimethoxyphenyl)-3-[3-(1H-imidazol-1-yl)propyl]thiourea | 20 |
| A1D48 | (3~{Z})-3-(1~{H}-benzimidazol-5-ylmethylidene)-4-oxidanyl-1~{H}-indol-2-one | 12 |
| A1D5C | (3~{Z})-3-(1~{H}-benzimidazol-5-ylmethylidene)-4-[(3~{R})-1-ethanoylpyrrolidin-3-yl]oxy-1~{H}-indol-2-one | 12 |
| A1D93 | N-(1H-benzo[d]imidazol-5-yl)-1-phenylmethanesulfonamide | 12 |
| A1D46 | 3-(1~{H}-benzimidazol-5-ylmethylidene)-4-piperidin-4-yloxy-1~{H}-indol-2-one | 11 |
| A1D47 | (3~{Z})-3-(1~{H}-benzimidazol-5-ylmethylidene)-4-(oxan-4-yloxy)-1~{H}-indol-2-one | 11 |
| COmetal | COBALT (II) ION | 11 |
| SCN | THIOCYANATE ION | 10 |
| MGmetal | MAGNESIUM ION | 9 |
| SMmetal | SAMARIUM (III) ION | 8 |
| A1EMG | 3-(1H-benzimidazol-5-yl)-5-[1-[2-(3,4-dimethoxyphenyl)ethanoyl]piperidin-4-yl]oxy-1H-benzimidazol-2-one | 6 |
| LEU | LEUCINE | 6 |
| S77 | 2-fluoranyl-5-[2-[4-(4-methyl-1,2,4-triazol-3-yl)piperidin-1-yl]pyridin-3-yl]pyridine | 6 |
| Kmetal | POTASSIUM ION | 5 |
| 1BN | 1-BENZYL-1H-IMIDAZOLE | 4 |