T-group (topology)
205.1.1 4Fe-4S ferredoxin
Ligands and drugs
4,957
Member domains
1,993
with ligand contacts (≤ 4 Å)
40.2% of members
1,290
with DrugDomain annotations
26.0% of members
354
with a DrugBank compound
7.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 205.1.1 belongs to X-group 205 4Fe-4S ferredoxin, which binds 7.8 ligand superclasses per 20 proteins, broader than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03429 | CDL | Tetrastearoyl cardiolipin | 79 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 61 |
| DB02832 | SRM | Siroheme | 48 |
| DB04327 | PEE | Phosphatidylethanolamine | 43 |
| DB03147 | FAD | Flavin adenine dinucleotide | 22 |
| DB18267 | HEM | Ferroheme | 11 |
| DB07349 | AGA | (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE | 8 |
| DB00172 | PRO | Proline | 7 |
| DB02078 | PG5 | Triglyme | 7 |
| DB03350 | NCO | Cobalt hexammine ion | 6 |
| DB13075 | MQ7 | Menaquinone 7 | 6 |
| DB00160 | ALA | Alanine | 4 |
| DB02777 | PLC | Diundecyl Phosphatidyl Choline | 4 |
| DB03247 | FMN | Flavin mononucleotide | 4 |
| DB16833 | ADP | Adenosine disphosphate | 4 |
| DB00149 | LEU | Leucine | 3 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 3 |
| DB00151 | CYS | Cysteine | 2 |
| DB00157 | — | NADH | 2 |
| DB01957 | 3CH | 3-Chlorophenol | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 1,970 |
| Kmetal | POTASSIUM ION | 125 |
| F3S | FE3-S4 CLUSTER | 124 |
| PC1 | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | 106 |
| 3PE | 1,2-Distearoyl-sn-glycerophosphoethanolamine | 102 |
| MGmetal | MAGNESIUM ION | 76 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 60 |
| PEE | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | 56 |
| CAmetal | CALCIUM ION | 52 |
| SRM | SIROHEME | 41 |
| CL | CHLORIDE ION | 40 |
| BVQ | NORPSEUDO-B12 | 38 |
| CDL | CARDIOLIPIN | 38 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 31 |
| B12 | COBALAMIN | 25 |
| NAmetal | SODIUM ION | 23 |
| ZNmetal | ZINC ION | 15 |
| FAD | FLAVIN-ADENINE DINUCLEOTIDE | 13 |
| PLX | (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL | 11 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 9 |