T-group (topology)
210.1.2 Penicillin acylase, catalytic domain
Ligands and drugs
740
Member domains
382
with ligand contacts (≤ 4 Å)
51.6% of members
246
with DrugDomain annotations
33.2% of members
158
with a DrugBank compound
21.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 210.1.2 belongs to X-group 210 Ntn/PP2C, which binds 7.8 ligand superclasses per 20 proteins, broader than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 21 |
| DB02691 | GCH | Glycocholic acid | 11 |
| DB00160 | ALA | Alanine | 10 |
| DB01956 | TAU | Taurine | 9 |
| DB04348 | TCH | Taurocholic acid | 8 |
| DB02659 | CHD | Cholic Acid | 7 |
| DB03600 | DKA | Capric acid | 6 |
| DB00134 | MET | Methionine | 5 |
| DB00172 | PRO | Proline | 5 |
| DB01822 | DTD | (4R,5R)-1,2-dithiane-4,5-diol | 4 |
| DB09269 | PAC | Phenylacetic acid | 4 |
| DB00139 | SIN | Succinic acid | 3 |
| DB00417 | PNV | Phenoxymethylpenicillin | 2 |
| DB03297 | PMS | Benzylsulfonic acid | 2 |
| DB06777 | JN3 | Chenodeoxycholic acid | 2 |
| DB00145 | GLY | Glycine | 1 |
| DB02664 | BUB | 1-Butane Boronic Acid | 1 |
| DB02693 | D1D | (4S,5S)-1,2-dithiane-4,5-diol | 1 |
| DB02994 | CAD | Cacodylic acid | 1 |
| DB03017 | DAO | Lauric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 111 |
| CL | CHLORIDE ION | 46 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 37 |
| WSR | (1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-1-[(2R)-6-fluoro-5-oxohexan-2-yl]-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-7-yl hydrogen sulfate (non-preferred name) | 16 |
| PAC | 2-PHENYLACETIC ACID | 12 |
| GCH | GLYCOCHOLIC ACID | 11 |
| TON | 2-{2-[4-(1,1,3,3-TETRAMETHYLBUTYL)PHENOXY]ETHOXY}ETHANOL | 11 |
| ALA | ALANINE | 10 |
| COmetal | COBALT (II) ION | 10 |
| NAmetal | SODIUM ION | 10 |
| WU5 | (5R)-1-fluoro-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-7-hydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]hexan-2-one (non-preferred name) | 10 |
| MGmetal | MAGNESIUM ION | 9 |
| TAU | 2-AMINOETHANESULFONIC ACID | 9 |
| DKA | DECANOIC ACID | 8 |
| TCH | TAUROCHOLIC ACID | 8 |
| WTF | [2-(ethylsulfonyl)phenyl][(2S)-4-(6-fluoro-1,3-benzothiazol-2-yl)-2-methylpiperazin-1-yl]methanone | 8 |
| XLK | (5R)-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11S,11aR)-7,11-dihydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]-1-fluorohexan-2-one (non-preferred name) | 8 |
| CHD | CHOLIC ACID | 7 |
| GRO | R-2-PHENYL-PROPRIONIC ACID | 6 |
| HJA | (2S)-3-amino-2-{[(4-cyclohexylbutoxy)carbonyl]amino}propanethioic S-acid | 6 |