F-group (family)
227.1.1.3 DNA_pol3_beta
Ligands and drugs
406
Member domains
118
with ligand contacts (≤ 4 Å)
29.1% of members
100
with DrugDomain annotations
24.6% of members
29
with a DrugBank compound
7.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 227.1.1.3 belongs to X-group 227 DNA clamp, which binds 7.6 ligand superclasses per 20 proteins, narrower than 51% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02078 | PG5 | Triglyme | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 40 |
| CL | CHLORIDE ION | 18 |
| NAmetal | SODIUM ION | 6 |
| IOD | IODIDE ION | 2 |
| Kmetal | POTASSIUM ION | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| 5CY | 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-yl}-3,3-dimethyl-3H-indolium | 1 |
| P4C | O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL | 1 |
| PG5 | 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE | 1 |