T-group (topology)
229.1.1 Cdc48 domain 2-like
Ligands and drugs
1,377
Member domains
65
with ligand contacts (≤ 4 Å)
4.7% of members
18
with DrugDomain annotations
1.3% of members
17
with a DrugBank compound
1.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 229.1.1 belongs to X-group 229 Cdc48 domain 2-like, which has 3 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01902 | NEN | 1-Ethyl-Pyrrolidine-2,5-Dione | 4 |
| DB03345 | BME | Mercaptoethanol | 3 |
| DB02210 | HEZ | Hexane-1,6-Diol | 1 |
| DB04395 | — | Phosphoaminophosphonic Acid-Adenylate Ester | 1 |
| DB12695 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ADP | ADENOSINE-5'-DIPHOSPHATE | 39 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 6 |
| BME | BETA-MERCAPTOETHANOL | 3 |
| NEN | 1-ETHYL-PYRROLIDINE-2,5-DIONE | 3 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 2 |
| CL | CHLORIDE ION | 2 |
| 6LY | (1S)-2-amino-1-(4-bromophenyl)ethan-1-ol | 1 |
| COmetal | COBALT (II) ION | 1 |
| HEZ | HEXANE-1,6-DIOL | 1 |
| NAmetal | SODIUM ION | 1 |