H-group (homology)
234.3 Colicin D nuclease domain
Ligands and drugs
33
Member domains
12
with ligand contacts (≤ 4 Å)
36.4% of members
11
with DrugDomain annotations
33.3% of members
4
with a DrugBank compound
12.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 234.3 belongs to X-group 234 Microbial ribonucleases-like, which has 14 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03448 | UM3 | 2'-Deoxyuridine 3'-Monophosphate | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 4 |
| 3PD | 2-AMINO-9-(2-DEOXY-3-O-PHOSPHONOPENTOFURANOSYL)-1,9-DIHYDRO-6H-PURIN-6-ONE | 2 |
| CDmetal | CADMIUM ION | 2 |
| UM3 | 2'-DEOXYURIDINE 3'-MONOPHOSPHATE | 1 |