T-group (topology)
246.3.1 DNase I-like
Ligands and drugs
1,652
Member domains
469
with ligand contacts (≤ 4 Å)
28.4% of members
450
with DrugDomain annotations
27.2% of members
288
with a DrugBank compound
17.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 246.3.1 belongs to X-group 246 Carbon-nitrogen hydrolase-like, which binds 9.3 ligand superclasses per 20 proteins, broader than 85% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02676 | B3P | 2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-Diol | 15 |
| DB18267 | HEM | Ferroheme | 9 |
| DB09459 | TLA | L-tartaric acid | 4 |
| DB00141 | NAG | N-Acetylglucosamine | 2 |
| DB01694 | TAR | D-tartaric acid | 2 |
| DB03158 | 2IP | D-Myo-Inositol-1,4-Bisphosphate | 2 |
| DB00131 | AMP | Adenosine phosphate | 1 |
| DB00139 | SIN | Succinic acid | 1 |
| DB00144 | — | Phosphatidyl serine | 1 |
| DB00452 | NMY | Framycetin | 1 |
| DB00640 | ADN | Adenosine | 1 |
| DB02338 | NDP | NADPH | 1 |
| DB02726 | PGA | 2-Phosphoglycolic Acid | 1 |
| DB02831 | 2HP | Dihydrogenphosphate | 1 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 1 |
| DB03685 | U | Uridine monophosphate | 1 |
| DB03709 | BCN | Bicine | 1 |
| DB04967 | — | — | 1 |
| DB11588 | CMO | Carbon monoxide | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 156 |
| CL | CHLORIDE ION | 45 |
| CAmetal | CALCIUM ION | 28 |
| MNmetal | MANGANESE (II) ION | 24 |
| NAmetal | SODIUM ION | 17 |
| B3P | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 15 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 9 |
| D5M | 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE | 7 |
| 6AH | 6-aminohexan-1-ol | 6 |
| PBmetal | LEAD (II) ION | 6 |
| BR | BROMIDE ION | 5 |
| COmetal | COBALT (II) ION | 4 |
| GID | 5-nitro-1H-indole-2-carboxylic acid | 4 |
| NO | NITRIC OXIDE | 4 |
| TLA | L(+)-TARTARIC ACID | 4 |
| 6FQ | 2,4-dioxo-10-[3-(1H-tetrazol-5-yl)phenyl]-2,3,4,10-tetrahydropyrimido[4,5-b]quinoline-8-carbonitrile | 3 |
| DGP | 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE | 3 |
| 3DR | 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE | 2 |
| 6FV | 10-(4-hydroxyphenyl)-2,4-dioxo-2,3,4,10-tetrahydropyrimido[4,5-b]quinoline-8-carbonitrile | 2 |
| D7I | 5,5'-(ethane-1,2-diylbis(oxy))bis(benzene-5,4,2,1,-tetrayl)hexakisphosphate | 2 |