T-group (topology)
2487.1.1 The "swivelling" beta/beta/alpha domain
Ligands and drugs
8,584
Member domains
655
with ligand contacts (≤ 4 Å)
7.6% of members
398
with DrugDomain annotations
4.6% of members
256
with a DrugBank compound
3.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2487.1.1 belongs to X-group 2487 The "swivelling" beta/beta/alpha domains, which binds 8.6 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 120 |
| DB00131 | AMP | Adenosine phosphate | 13 |
| DB00139 | SIN | Succinic acid | 10 |
| DB00130 | GLN | L-Glutamine | 8 |
| DB00142 | GLU | Glutamic acid | 5 |
| DB09459 | TLA | L-tartaric acid | 5 |
| DB00129 | ORN | Ornithine | 4 |
| DB00676 | BZM | Benzyl benzoate | 4 |
| DB02897 | UVW | Acetylphosphate | 4 |
| DB03376 | A5A | 5'-O-(N-(Alanyl)sulfamoyl)adenosine | 4 |
| DB04351 | TRA | Aconitate Ion | 4 |
| DB02999 | QUS | Quisqualic acid | 3 |
| DB04343 | GLV | Glyoxylic acid | 3 |
| DB04562 | TRC | Tricarballylic acid | 3 |
| DB09157 | CO2 | Carbon dioxide | 3 |
| DB01819 | PEP | Phosphoenolpyruvate | 2 |
| DB02175 | MLA | Malonic acid | 2 |
| DB02606 | SBT | 2-Butanol | 2 |
| DB02916 | LMS | [(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4-Dihydroxytetrahydro-2-Furanyl]Methyl Sulfamate | 2 |
| DB03964 | ATH | 4-Hydroxy-Aconitate Ion | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 154 |
| CAmetal | CALCIUM ION | 137 |
| MGmetal | MAGNESIUM ION | 108 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 77 |
| CL | CHLORIDE ION | 46 |
| Kmetal | POTASSIUM ION | 40 |
| MNmetal | MANGANESE (II) ION | 40 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 33 |
| ZNmetal | ZINC ION | 33 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 28 |
| TLmetal | THALLIUM (I) ION | 28 |
| NAmetal | SODIUM ION | 17 |
| AF3 | ALUMINUM FLUORIDE | 16 |
| 23J | oxo(2-sulfanylphenyl)acetic acid | 12 |
| AMP | ADENOSINE MONOPHOSPHATE | 11 |
| SIN | SUCCINIC ACID | 10 |
| DSZ | 5'-O-(L-alpha-aspartylsulfamoyl)adenosine | 8 |
| GLN | GLUTAMINE | 8 |
| HEZ | HEXANE-1,6-DIOL | 8 |
| SMmetal | SAMARIUM (III) ION | 8 |