ECOD
T-group (topology)

2494.1.1 DTD-like (Pfam 02580)

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Ligands and drugs

780
Member domains
113
with ligand contacts (≤ 4 Å)
14.5% of members
114
with DrugDomain annotations
14.6% of members
54
with a DrugBank compound
6.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2494.1.1 belongs to X-group 2494 DTD-like, which has 10 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB04024A3SSerine-3'-aminoadenosine20
DB16833ADPAdenosine disphosphate13
DB03929DSND-Serine4
DB02517DGLD-Glutamic Acid2
DB03252DLYD-Lysine2
DB03355TSB5'-O-(L-Threonylsulfamoyl)adenosine2
DB03869SSA5'-O-(L-Serylsulfamoyl)adenosine2
DB04027DARD-arginine2
DB00133SERSerine1

Most frequently bound compounds

PDB ligandNameDomains in contact
A3SSERINE-3'-AMINOADENOSINE20
A3T3'-deoxy-3'-(L-threonylamino)adenosine15
IODIODIDE ION14
ADPADENOSINE-5'-DIPHOSPHATE13
A3G3'-deoxy-3'-(glycylamino)adenosine10
D3Y3'-deoxy-3'-(D-tyrosylamino)adenosine10
MGmetalMAGNESIUM ION7
ZNmetalZINC ION4
DSND-SERINE3
CLCHLORIDE ION2
DARD-ARGININE2
DGLD-GLUTAMIC ACID2
DHID-HISTIDINE2
DLYD-LYSINE2
SO3SULFITE ION2
SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE2
TSB5'-O-(N-(L-THREONYL)-SULFAMOYL)ADENOSINE2
SERSERINE1