254 Prion-like
Ligands and drugs
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.
The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.
| Superclass | Proteins | Expected | 0.25×observed / expected4× | Ratio | Significance |
|---|---|---|---|---|---|
| Homogeneous non-metal compounds | 4 | 1.3 | 3.14× | not tested | |
| Organoheterocyclic compounds | 2 | 0.9 | 2.20× | not tested | |
| Organic acids and derivatives | 1 | 0.9 | 1.09× | not tested | |
| Homogeneous metal compounds | 1 | 2.9 | 0.34× | not tested |
Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00143 | GSH | Glutathione | 1 |
| DB00152 | VIB | Thiamine | 1 |
| DB00420 | P2Z | Promazine | 1 |
| DB00477 | Z80 | Chlorpromazine | 1 |
| DB00759 | — | Tetracycline | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 12 |
| CDmetal | CADMIUM ION | 9 |
| NAmetal | SODIUM ION | 9 |
| GSH | Glutathione | 1 |
| P2Z | Promazine | 1 |
| VIB | 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM | 1 |
| Z80 | 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine | 1 |