F-group (family)
264.1.1.9 2_5_RNA_ligase2
Ligands and drugs
113
Member domains
20
with ligand contacts (≤ 4 Å)
17.7% of members
20
with DrugDomain annotations
17.7% of members
13
with a DrugBank compound
11.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 264.1.1.9 belongs to X-group 264 LigT-like, which has 11 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 4 |
| DB00171 | ATP | ATP | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 9 |
| 2AM | ADENOSINE-2'-MONOPHOSPHATE | 4 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 4 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 3 |
| 3AM | [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate | 2 |
| MGmetal | MAGNESIUM ION | 1 |