F-group (family)
279.1.1.1 Ldh_1_C
Ligands and drugs
2,181
Member domains
930
with ligand contacts (≤ 4 Å)
42.6% of members
854
with DrugDomain annotations
39.2% of members
702
with a DrugBank compound
32.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 279.1.1.1 belongs to X-group 279 LDH C-terminal domain-like, which binds 7.4 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB14128 | NAD | Nadide | 251 |
| DB00157 | NAI | NADH | 171 |
| DB03940 | OXM | Oxamic Acid | 88 |
| DB04551 | FBP | beta-D-fructofuranose 1,6-bisphosphate | 35 |
| DB00119 | PYR | Pyruvic acid | 25 |
| DB02637 | OAA | Oxaloacetate Ion | 15 |
| DB03066 | LAC | D-Lactic acid | 13 |
| DB02401 | OXQ | 4-Hydroxy-1,2,5-oxadiazole-3-carboxylic acid | 11 |
| DB02175 | MLA | Malonic acid | 10 |
| DB03363 | A3D | 3-Acetylpyridine Adenine Dinucleotide | 10 |
| DB14475 | 2OP | L-Lactic acid | 8 |
| DB16833 | ADP | Adenosine disphosphate | 7 |
| DB01677 | FUM | Fumaric acid | 6 |
| DB02338 | NDP | NADPH | 6 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 5 |
| DB00117 | HIS | Histidine | 3 |
| DB02249 | ETX | 2-Ethoxyethanol | 3 |
| DB03709 | BCN | Bicine | 3 |
| DB11091 | PEO | Hydrogen peroxide | 3 |
| DB11638 | — | — | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAD | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 257 |
| NAI | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | 187 |
| OXM | OXAMIC ACID | 112 |
| CL | CHLORIDE ION | 66 |
| FBP | 1,6-di-O-phosphono-beta-D-fructofuranose | 44 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 36 |
| PYR | PYRUVIC ACID | 25 |
| NAmetal | SODIUM ION | 22 |
| AGmetal | SILVER ION | 20 |
| CAmetal | CALCIUM ION | 15 |
| OAA | OXALOACETATE ION | 15 |
| LAC | LACTIC ACID | 13 |
| 6V0 | [[(2~{R},3~{S},4~{R},5~{R})-5-(5-aminocarbonyl-2~{H}-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate | 12 |
| CDmetal | CADMIUM ION | 11 |
| LMR | (2S)-2-hydroxybutanedioic acid | 11 |
| MLA | MALONIC ACID | 11 |
| OXQ | 4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID | 11 |
| A3D | 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE | 10 |
| 1E4 | 1-O-[3-(5-carboxypyridin-2-yl)-5-fluorophenyl]-6-O-[4-({[(5-carboxypyridin-2-yl)sulfanyl]acetyl}amino)-2-chloro-5-methoxyphenyl]-D-mannitol | 8 |
| 1E5 | 6-[3-(carboxymethoxy)-5-fluorophenyl]pyridine-3-carboxylic acid | 8 |