T-group (topology)
285.1.1 N-acetylmuramoyl-L-alanine amidase-like
Ligands and drugs
372
Member domains
228
with ligand contacts (≤ 4 Å)
61.3% of members
226
with DrugDomain annotations
60.8% of members
158
with a DrugBank compound
42.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 285.1.1 belongs to X-group 285 N-acetylmuramoyl-L-alanine amidase-like, which binds 6.4 ligand superclasses per 20 proteins, narrower than 70% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB09459 | TLA | L-tartaric acid | 63 |
| DB00141 | NAG | N-Acetylglucosamine | 19 |
| DB04736 | MLD | 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE(BETA1-4)-2-ACETAMIDO-1,6-ANHYDRO-3-O-[(R)-1-CARBOXYETHYL]-2-DEOXY-BETA-D-GLUCOPYRANOSE-L-ALANYL-GAMMA-D-GLUTAMYL-MESO-DIAMINOPIMELYL-D-ALANINE | 10 |
| DB00160 | ALA | Alanine | 6 |
| DB03193 | STE | Stearic acid | 6 |
| DB14756 | SRT | meso-Tartaric acid | 6 |
| DB11091 | PEO | Hydrogen peroxide | 4 |
| DB02174 | DGN | D-Glutamine | 3 |
| DB02938 | SHV | Heptanoic acid | 3 |
| DB03017 | DAO | Lauric acid | 3 |
| DB03590 | API | 2,6-Diaminopimelic Acid | 3 |
| DB03796 | PLM | Palmitic Acid | 3 |
| DB08231 | MYR | Myristic acid | 3 |
| DB01694 | TAR | D-tartaric acid | 2 |
| DB02517 | DGL | D-Glutamic Acid | 2 |
| DB03066 | LAC | D-Lactic acid | 2 |
| DB03568 | BUA | Butyric Acid | 2 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 2 |
| DB03940 | OXM | Oxamic Acid | 2 |
| DB00142 | GLU | Glutamic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| TLA | L(+)-TARTARIC ACID | 63 |
| ZNmetal | ZINC ION | 61 |
| NAmetal | SODIUM ION | 13 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 13 |
| LP5 | (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE | 9 |
| 6NA | HEXANOIC ACID | 8 |
| MLD | GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA | 8 |
| CL | CHLORIDE ION | 7 |
| ALA | ALANINE | 6 |
| SRT | S,R MESO-TARTARIC ACID | 6 |
| STE | STEARIC ACID | 6 |
| 11Z | 11-cyclohexylundecanoic acid | 4 |
| NImetal | NICKEL (II) ION | 4 |
| PEO | HYDROGEN PEROXIDE | 4 |
| PNR | 4-nitrophenyl hexadecanoate | 4 |
| RAM | alpha-L-rhamnopyranose | 4 |
| XXC | 7-phenylheptanoic acid | 4 |
| AMU | N-acetyl-beta-muramic acid | 3 |
| DGN | D-GLUTAMINE | 3 |
| ISJ | (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid | 3 |